| Type of Material: | Thesis |
| Title: | Comparative transcriptome profiling of Salinicola sp MFB021 in response to salinity stress |
| Researcher: | Baby, Anju |
| Guide: | Joseph, Toms C and Lalitha, K V |
| Department: | Central Institute of Fisheries Technology |
| Publisher: | Cochin University of Science & Technology, Cochin |
| Place: | Cochin |
| Year: | 2019 |
| Language: | English |
| Subject: | Bacterial halotolerant response mechanism | Life Sciences | Marine and Freshwater Biology | Osmoregulation | Plant and Animal Science | Transcriptome Analysis | Life Sciences | Life Science |
| Dissertation/Thesis Note: | PhD; Central Institute of Fisheries Technology, Cochin University of Science & Technology, Cochin, Cochin; 2019 |
| Fulltext: | Shodhganga |
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| 001 | 456484 | |
| 003 | IN-AhILN | |
| 005 | 2024-10-10 14:08:42 | |
| 008 | __ | 241010t2019||||ii#||||g|m||||||||||eng|| |
| 035 | __ | |a(IN-AhILN)th_456484 |
| 040 | __ | |aCUST_682022|dIN-AhILN |
| 041 | __ | |aeng |
| 100 | __ | |aBaby, Anju|eResearcher |
| 110 | __ | |aCentral Institute of Fisheries Technology|bCochin University of Science & Technology, Cochin|dCochin|ein|0U-0253 |
| 245 | __ | |aComparative transcriptome profiling of Salinicola sp MFB021 in response to salinity stress |
| 260 | __ | |aCochin|bCochin University of Science & Technology, Cochin|c2019 |
| 300 | __ | |a314|dDVD |
| 502 | __ | |cCentral Institute of Fisheries Technology, Cochin University of Science & Technology, Cochin, Cochin|d2019|bPhD |
| 518 | __ | |d2023|oDate of Award |
| 518 | __ | |oDate of Registration|d2014 |
| 520 | __ | |aSalinicola sp. MFB021 is a moderately halophilic, aerobic, bacterium that grows in a wide salinity range of 0.5 to 30% (wt/vol) NaCl, which belongs to Halomonedacea family. The aim of this study was to analyse the comparative transcriptome profiling of Salinicola sp. MFB021 to identify novel genes and their corresponding pathways exclusively expressed under various levels of salinity stress. Differential gene expression analysis of Salinicola sp. MFB021 will improve our understanding of molecular events involved in lower to higher level transition of growth under salt tolerance (1M to 4M NaCl); identified by de novo transcriptome analysis using RNA sequencing. Whole transcriptome sequencing of four cDNA libraries representing the growth transition of Salinicola sp. MFB021 in 1M NaCl, 1M to 2.5M NaCl, 2.5M to 4M NaCl and 1M to 4M NaCl was performed. RNA-Seq reads for each cDNA library generated approximately 9 to 10 million reads. De novo transcriptome assembly generated from RNA-Seq data of all the stages r |
| 650 | __ | |aLife Sciences|2UGC |
| 650 | __ | |aLife Science|2AIU |
| 653 | __ | |aBacterial halotolerant response mechanism |
| 653 | __ | |aLife Sciences |
| 653 | __ | |aMarine and Freshwater Biology |
| 653 | __ | |aOsmoregulation |
| 653 | __ | |aPlant and Animal Science |
| 653 | __ | |aTranscriptome Analysis |
| 700 | __ | |eGuide|aJoseph, Toms C and Lalitha, K V |
| 856 | __ | |uhttp://shodhganga.inflibnet.ac.in/handle/10603/480413|yShodhganga |
| 905 | __ | |afromsg |
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